Removing adaptors from smallRNA seq data
Team 2: Genome Assembly Background and Strategy
National Center for Genome Analysis Support: Carrie Ganote Ram Podicheti Le-Shin Wu Tom Doak Quality Control and Assessment. - ppt download
Best adapter trimming? - SEQanswers
Quality Control
Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads | BMC Bioinformatics | Full Text
Read QC and trimming
Gigabyte
Read trimming is not required for mapping and quantification of RNA-seq reads
Best adapter trimming? - SEQanswers
Atria: an ultra-fast and accurate trimmer for adapter and quality trimming
Transcriptomic Profiling Using Next Generation Sequencing - Advances, Advantages, and Challenges | IntechOpen
How to remove Illumina_small_rna_3'_adapter adapters without knowing their sequence?
Trimming — VATK 0.1 documentation
Trimming — VATK 0.1 documentation
Adapter and quality trimming Illumina data with Fastp | Daniel Bruzzese
Gigabyte
Explore the RNA-sequencing and the next-generation sequencing in crops responding to abiotic stress - ScienceDirect
8_Transcriptome Assembly – BCH709 Introduction to Bioinformatics
Read trimming has minimal effect on bacterial SNP calling accuracy | bioRxiv
rna seq - What are the right parameters to trim a small RNA transcriptome with trimmomatic? - Bioinformatics Stack Exchange
Adapter and quality trimming using trim-galore — Inclass Activities 170218 documentation
rna seq - What are the right parameters to trim a small RNA transcriptome with trimmomatic? - Bioinformatics Stack Exchange
Comparison of various tools for trimming adapters | Download Table
